PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00000072-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family FAR1
Protein Properties Length: 355aa    MW: 39924.6 Da    PI: 9.1606
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00000072-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.67.7e-2243117189
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                            +fY+ YA++vGF++r+ + ++s+ +g++++r+fvCskeg++++              +rtgC a ++v+k ++gkw+v+++++eHnHe
  SMil_00000072-RA_Salv  43 EFYSMYATQVGFKIRIGQLYRSRVDGSVISRRFVCSKEGFQTN--------------SRTGCPAFIRVQKVDSGKWVVANIKKEHNHE 116
                            6***************************************987..............589***************************9 PP

                   FAR1  89 l 89 
                            +
  SMil_00000072-RA_Salv 117 V 117
                            7 PP

2FAR166.95.2e-21194268189
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                            kfY +YA+++GF++r+ +  +sk++g+it+r+fvCskeg++++              +r+gC a ++++++++g+w+v++l++eHnH+
  SMil_00000072-RA_Salv 194 KFYYAYATNMGFRIRIGQLFRSKHDGSITSRRFVCSKEGHQHP--------------SRVGCGAYMRIQRHESGRWVVDRLQKEHNHA 267
                            6**************************************9998..............4899**************************9 PP

                   FAR1  89 l 89 
                            l
  SMil_00000072-RA_Salv 268 L 268
                            8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-1743117IPR004330FAR1 DNA binding domain
PfamPF031012.0E-16194268IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MTVRTKPAAL VVGISNGHQE NEGESKMEPH VGLEFNTAEE AQEFYSMYAT QVGFKIRIGQ  60
LYRSRVDGSV ISRRFVCSKE GFQTNSRTGC PAFIRVQKVD SGKWVVANIK KEHNHEVEAS  120
GEICPSRIQR KSFPTPRSST GGASRTGIRS HEDDSPSAVV DIKRLKKEEM DAVNGPSGEP  180
SKGLEFNSAN DAYKFYYAYA TNMGFRIRIG QLFRSKHDGS ITSRRFVCSK EGHQHPSRVG  240
CGAYMRIQRH ESGRWVVDRL QKEHNHALGS PLDPNRTVNG TPKGCREEGS SVLENLDLVE  300
TNGGLSLVKR GRESRIDNDW EEARNYIEAG TASLERYKLA FEIMQEGRRN FCWQN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090830.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X2
SwissprotQ9M8J31e-108FRS7_ARATH; Protein FAR1-RELATED SEQUENCE 7
TrEMBLA0A022RZV51e-172A0A022RZV5_ERYGU; Uncharacterized protein
STRINGSolyc10g084220.1.11e-152(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA73472130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-109FAR1-related sequence 7